When a project is opened in the Atomes workspace, and if this project is the active project, then it it possible to compute the properties presented in section 3.4, and the parameter(s) of the calculation(s) can be adjusted via the associated dialog boxes accessible by using the "
Analyze" menu [Fig. 3.1-d].
Some of the calculations of the "
Analyze menu" are immediately available when a project is opened, other require some condition(s) to be full-filled before being accessible:
g(r)/G(r): requires a model box to be described.
S(q) from FFT[g(r)]: requires  to be completed.
S(q) from Debye equation: requires a model box to be described.
g(r)/G(r) from FFT[S(q)]: requires  to be completed.
Bonds and angles: no conditions.
Ring statistics: no conditions.
Chain statistics: no conditions.
Spherical harmonics: requires  to be completed.
Mean Squared Displacement: requires the project have more than 1 configuration (MD trajectory).