Functions to create the 'User preferences' window. More...

#include "global.h"
#include "callbacks.h"
#include "interface.h"
#include "project.h"
#include "workspace.h"
#include "glview.h"
#include "glwin.h"
#include "bind.h"
#include "preferences.h"
#include <libxml/encoding.h>
#include <libxml/xmlwriter.h>
#include <libxml/xmlreader.h>
#include <libxml/parser.h>
#include <unistd.h>
#include <sys/types.h>
#include <pwd.h>

Include dependency graph for preferences.c:

Go to the source code of this file.

Functions
void	apply_default_parameters_to_project (project *this_proj)
	apply new default parameters to project

xmlNodePtr	findnode (xmlNodePtr startnode, char *nname)
	find XML node

void	edit_bonds (GtkWidget *vbox)
	creation of the edit bond cutoff widgets

void	calc_rings (GtkWidget *vbox)
	creation of the rings statistics calculation widgets

gchar *	substitute_string (gchar init, gchar o_motif, gchar *n_motif)
	substitute all patterns in string

G_MODULE_EXPORT gboolean	scroll_scale_quality (GtkRange *range, GtkScrollType scroll, gdouble value, gpointer data)
	update OpenGL quality - scroll callback

GtkWidget *	materials_tab (glwin view, opengl_edition ogl_edit, Material *the_mat)
	OpenGL material parameters tab.

GtkWidget *	lights_tab (glwin view, opengl_edition ogl_edit, Lightning *the_light)
	OpenGL light(s) parameters tab.

GtkWidget *	fog_tab (glwin view, opengl_edition ogl_edit, Fog *the_fog)
	OpenGL fog parameters tab.

GtkWidget *	labels_tab (glwin *view, int lid)
	create atomic label(s) tab for the atom(s) / clone(s) window

void	update_light_data (int li, opengl_edition *ogl_win)
	update light data

void	setup_fog_dialogs (opengl_edition *ogl_edit, int fid)
	update OpenGL fog tab based of fog type

G_MODULE_EXPORT void	box_advanced (GtkWidget *widg, gpointer data)
	create the box edition window

G_MODULE_EXPORT void	axis_advanced (GtkWidget *widg, gpointer data)
	create the axis advanced parameters window

G_MODULE_EXPORT void	representation_advanced (GtkWidget *widg, gpointer data)
	open advanced representation dialog

void	update_gradient_widgets (gradient_edition gradient_win, background back)
	update the widgets of the gradient window

G_MODULE_EXPORT void	gradient_advanced (GtkWidget *widg, gpointer data)
	Background configuration window.

G_MODULE_EXPORT void	scale_quality (GtkRange *range, gpointer data)
	update OpenGL quality - range callback

void	duplicate_fog (Fog new_fog, Fog old_fog)
	duplicate fog data

void	duplicate_material (Material new_mat, Material old_mat)
	duplicate material data

void	duplicate_screen_label (screen_label new_lab, screen_label old_lab)
	copy screen_label data structure

Light	init_light_source (int type, float val, float vbl)
	initialize a light source

Light *	copy_light_sources (int dima, int dimb, Light *old_sp)
	create a copy of a list of light sources

GtkWidget *	lightning_fix (glwin view, Material this_material)

GtkWidget *	adv_box (GtkWidget box, char lab, int vspace, int size, float xalign)
	create a box with markup label

int	xml_save_color_to_file (xmlTextWriterPtr writer, int did, gchar legend, gchar key, ColRGBA col)
	save color data (red, green, blue, alpha) to XML file

int	xml_save_xyz_to_file (xmlTextWriterPtr writer, int did, gchar legend, gchar key, vec3_t data)
	save vector data (x,y,z) to XML file

int	xml_save_parameter_to_file (xmlTextWriterPtr writer, gchar xml_leg, gchar xml_key, gboolean doid, int xml_id, gchar *value)
	save single parameter to XML file

int	save_preferences_to_xml_file ()
	save software preferences to XML file

double	xml_string_to_double (gchar *content)
	convert XML string to double

void	set_parameter (gchar content, gchar key, int vid, dint bond, vec3_t vect, float start, float end, ColRGBA *col)
	set default parameter

void	read_parameter (xmlNodePtr parameter_node)
	read preferences from XML configuration

void	read_light (xmlNodePtr light_node)
	read light preferences from XML configuration

void	read_preferences (xmlNodePtr preference_node)
	read preferences from XML configuration

void	read_style_from_xml_file (xmlNodePtr style_node, int style)
	read style preferences from XML file

void	read_preferences_from_xml_file ()
	read software preferences from XML file

void	set_atomes_defaults ()
	set atomes default parameters

void	set_atomes_preferences ()
	set software default parameters

GtkWidget *	pref_list (gchar mess[2], int nelem, gchar mlist[nelem][2], gchar *end)
	print information message with item list of elements

G_MODULE_EXPORT void	set_measures (GtkComboBox *box, gpointer data)
	change measure type

G_MODULE_EXPORT void	set_selection_color (GtkColorChooser *colob, gpointer data)
	change selection color

GtkWidget *	view_preferences ()
	view preferences

G_MODULE_EXPORT void	toggled_default_stuff (GtkToggleButton *but, gpointer data)
	toggle set / unset default callback GTK3

G_MODULE_EXPORT void	set_default_stuff (GtkEntry *res, gpointer data)
	update default number of delta preferences

element_radius *	duplicate_element_radius (element_radius *old_list)
	duplicate an element radius data structure

float	get_radius (int object, int col, int z, element_radius *rad_list)
	retrieve the radius/width of a species depending on style

element_color *	duplicate_element_color (element_color *old_list)
	duplicate an element color data structure

ColRGBA	get_spec_color (int z, element_color *clist)
	retrieve the color of a chemical species

G_MODULE_EXPORT void	edit_pref (GtkCellRendererText cell, gchar path_string, gchar *new_text, gpointer user_data)
	edit cell in the preferences tree model

G_MODULE_EXPORT void	edit_chem_preferences (GtkDialog *edit_chem, gint response_id, gpointer data)
	edit chem preferences - running the dialog

void	color_set_color (GtkTreeViewColumn col, GtkCellRenderer renderer, GtkTreeModel mod, GtkTreeIter iter, gpointer data)
	set background color

void	radius_set_color_and_markup (GtkTreeViewColumn col, GtkCellRenderer renderer, GtkTreeModel mod, GtkTreeIter iter, gpointer data)
	set text font and color

gboolean	are_identical_colors (ColRGBA col_a, ColRGBA col_b)
	test if two colors are identicals

G_MODULE_EXPORT void	run_ac_color (GtkDialog *win, gint response_id, gpointer data)
	window color chooser - running the dialog

void	color_button_event (GtkWidget *widget, double event_x, double event_y, guint event_button, gpointer data)
	species color selection mouse button event

G_MODULE_EXPORT gboolean	pref_color_button_event (GtkWidget widget, GdkEvent event, gpointer data)

G_MODULE_EXPORT void	set_stuff_color (GtkColorChooser *colob, gpointer data)
	change stuff color

G_MODULE_EXPORT void	edit_species_parameters (GtkButton *but, gpointer data)
	edit atoms and bonds species related parameters

GtkWidget *	over_param (int object, int style)
	create override check button and entry

GtkWidget *	style_tab (int style)
	create preferences tab for a style

GtkWidget *	model_preferences ()
	model preferences

G_MODULE_EXPORT void	set_default_style (GtkComboBox *box, gpointer data)
	change default atom(s) and bond(s) style

GtkTreeModel *	style_combo_tree ()
	create opengl style combo model

G_MODULE_EXPORT void	set_default_map (GtkComboBox *box, gpointer data)
	change default atom(s) or polyhedra color map

GtkWidget *	combo_map (int obj)
	create color map combo

GtkWidget *	opengl_preferences ()
	OpenGL preferences.

G_MODULE_EXPORT void	set_default_num_delta (GtkEntry *res, gpointer data)
	update default number of delta preferences

G_MODULE_EXPORT void	tunit_changed (GtkComboBox *box, gpointer data)
	change default time units

G_MODULE_EXPORT void	totcut_changed (GtkComboBox *box, gpointer data)
	change method to evaluate the total cutoff

G_MODULE_EXPORT void	edit_pc_value (GtkEntry *res, gpointer data)
	update partial cutoff value

G_MODULE_EXPORT void	toggled_use_cutoff (GtkToggleButton *but, gpointer data)

void	add_cut_box ()
	update partial cutoffs widgets

gboolean	not_in_cutoffs (int z_a, int z_b)
	look in bond cutoff between species a and b is already defined

G_MODULE_EXPORT void	cut_spec_changed (GtkComboBox *box, gpointer data)
	partial cutoff chemical species

bond_cutoff *	duplicate_cutoffs (bond_cutoff *old_cutoff)
	duplicate bond cutoff data structure

G_MODULE_EXPORT void	edit_cutoffs (GtkDialog *edit_cuts, gint response_id, gpointer data)
	edit partial cutoffs - running the dialog

G_MODULE_EXPORT void	set_cutoffs_default (GtkButton *but, gpointer data)
	set default cutoff radii

GtkWidget *	calc_preferences ()
	analysis preferences

void	clean_all_tmp ()
	free all temporary buffers

void	duplicate_rep_data (rep_data new_rep, rep_data old_rep)
	duplicate rep_data data structure

void	duplicate_background_data (background new_back, background old_back)
	duplicate background data structure

void	duplicate_box_data (box new_box, box old_box)
	duplicate box_data data structure

void	duplicate_axis_data (axis new_axis, axis old_axis)
	duplicate axis_data data structure

void	prepare_tmp_default ()
	prepare temporary parameters

G_MODULE_EXPORT void	update_projects (GtkDialog *proj_sel, gint response_id, gpointer data)
	update projects in the workspace using new preferences

G_MODULE_EXPORT void	toggled_select_project (GtkToggleButton *but, gpointer data)
	toggle select / unselect project to update callback GTK3

void	save_preferences ()
	save user preferences

void	adjust_preferences_window ()
	adjust the widgets of the preferences window

G_MODULE_EXPORT void	restore_defaults_parameters (GtkButton *but, gpointer data)

G_MODULE_EXPORT void	edit_preferences (GtkDialog *edit_prefs, gint response_id, gpointer data)
	edit preferences - running the dialog

void	create_user_preferences_dialog ()

G_MODULE_EXPORT void	set_default_options (GtkButton *but, gpointer data)
	set options as default options

void	add_global_option (GtkWidget vbox, tint oid)
	add a button to update global user preferences

Variables
int	search_type

float	mat_min_max [5][2]

gchar *	ogl_settings [3][10]

GtkWidget *	atom_entry_over [8]

GtkWidget *	bond_entry_over [6]

GtkWidget *	meas_combo

GtkWidget *	meas_box [2]

GtkWidget *	sel_combo

GtkWidget *	sel_box [2]

GtkWidget *	preference_notebook = NULL

double	default_totcut

double	tmp_totcut

bond_cutoff *	default_bond_cutoff

bond_cutoff *	tmp_bond_cutoff

int *	default_num_delta = NULL

int *	tmp_num_delta = NULL

double *	default_delta_t = NULL

double *	tmp_delta_t = NULL

int *	default_rsparam = NULL

int *	tmp_rsparam = NULL

int *	default_csparam = NULL

int *	tmp_csparam = NULL

element_radius *	default_atomic_rad [16]

element_radius *	tmp_atomic_rad [16]

element_radius *	default_bond_rad [6]

element_radius *	tmp_bond_rad [6]

element_color *	default_atom_color [2]

element_color *	tmp_atom_color [2]

element_color *	default_label_color [2]

element_color *	tmp_label_color [2]

int	radius_id

int *	default_opengl = NULL

int *	tmp_opengl = NULL

Material	default_material

Material	tmp_material

Lightning	default_lightning

Lightning	tmp_lightning

Fog	default_fog

Fog	tmp_fog

gboolean	default_clones

gboolean	tmp_clones

gboolean	default_cell

gboolean	tmp_cell

gboolean *	default_o_at_rs

gboolean *	tmp_o_at_rs

double *	default_at_rs

double *	tmp_at_rs

gboolean *	default_o_bd_rw

gboolean *	tmp_o_bd_rw

double *	default_bd_rw

double *	tmp_bd_rw

screen_label	default_label [5]

screen_label *	tmp_label [5]

int	default_acl_format [2]

int	tmp_acl_format [2]

gboolean	default_mtilt [2]

gboolean	tmp_mtilt [2]

int	default_mpattern [2]

int	tmp_mpattern [2]

int	default_mfactor [2]

int	tmp_mfactor [2]

double	default_mwidth [2]

double	tmp_mwidth [2]

rep_data	default_rep

rep_data *	tmp_rep = NULL

rep_edition *	pref_rep_win = NULL

background	default_background

background *	tmp_background = NULL

gradient_edition *	pref_gradient_win = NULL

box	default_box

box *	tmp_box = NULL

box_edition *	pref_box_win = NULL

axis	default_axis

axis *	tmp_axis = NULL

axis_edition *	pref_axis_win = NULL

ColRGBA	default_sel_color [2]

ColRGBA	tmp_sel_color [2]

gboolean	preferences = FALSE

opengl_edition *	pref_ogl_edit = NULL

gchar *	pref_error = NULL

tint *	pref_pointer = NULL

gchar *	xml_style_leg [6] = {"ball_and_stick", "wireframes", "spacefilled", "spheres", "cylinders", "dots"}

gchar *	xml_filled_leg [4] = {"covalent", "ionic", "van-der-waals", "crystal"}

gchar *	xml_atom_leg [3] = {"atoms_radius", "dot_size", "sphere_radius"}

gchar *	xml_bond_leg [3] = {"bond_radius", "wireframe_width", "cylinder_radius"}

int	label_id

int	the_object

element_radius **	edit_list

element_color *	color_list

GtkWidget *	pref_tree

gboolean	user_defined

GtkWidget *	edit_scrol

GtkWidget *	edit_colob

ColRGBA *	tmp_color

GtkWidget *	all_cut_box

GtkWidget *	cut_combo [2]

GtkWidget *	pcut_box [2]

GtkWidget *	tcut_entry

GtkWidget *	tcut_box

GtkWidget *	cut_comments

bond_cutoff *	cut_list

gboolean *	up_project

Detailed Description

Functions to create the 'User preferences' window.

Author: Sébastien Le Roux sebas.nosp@m.tien.nosp@m..lero.nosp@m.ux@i.nosp@m.pcms..nosp@m.unis.nosp@m.tra.f.nosp@m.r

Definition in file preferences.c.

Function Documentation

◆ add_cut_box()

void add_cut_box ( )

update partial cutoffs widgets

Definition at line 3904 of file preferences.c.

◆ add_global_option()

void add_global_option	(	GtkWidget *	vbox,
		tint *	oid )

add a button to update global user preferences

Parameters

the	widget to insert the button in
oid	the option id pointer

Definition at line 4932 of file preferences.c.

◆ adjust_preferences_window()

void adjust_preferences_window ( )

adjust the widgets of the preferences window

Definition at line 4687 of file preferences.c.

◆ adv_box()

GtkWidget * adv_box	(	GtkWidget *	box,
		char *	lab,
		int	vspace,
		int	size,
		float	xalign )

extern

create a box with markup label

Parameters

box	the box to insert the widget in
lab	label
vspace	vertical space
size	size
xalign	x alignement

Definition at line 151 of file w_advance.c.

◆ apply_default_parameters_to_project()

void apply_default_parameters_to_project ( project * this_proj )

extern

apply new default parameters to project

Parameters

this_proj the target project

Definition at line 86 of file init_p.c.

◆ are_identical_colors()

gboolean are_identical_colors	(	ColRGBA	col_a,
		ColRGBA	col_b )

test if two colors are identicals

Parameters

col_a	first color to test
col_b	second color to test

Definition at line 2977 of file preferences.c.

◆ axis_advanced()

G_MODULE_EXPORT void axis_advanced	(	GtkWidget *	widg,
		gpointer	data )

extern

create the axis advanced parameters window

Parameters

widg	the GtkWidget sending the signal
data	the associated data pointer

Definition at line 786 of file w_axis.c.

◆ box_advanced()

G_MODULE_EXPORT void box_advanced	(	GtkWidget *	widg,
		gpointer	data )

extern

create the box edition window

Parameters

widg	the GtkWidget sending the signal
data	the associated data pointer

Definition at line 338 of file w_box.c.

◆ calc_preferences()

GtkWidget * calc_preferences ( )

analysis preferences

Definition at line 4131 of file preferences.c.

◆ calc_rings()

void calc_rings ( GtkWidget * vbox )

extern

creation of the rings statistics calculation widgets

Parameters

vbox	GtkWidget that will receive the data

Definition at line 516 of file calc_menu.c.

◆ clean_all_tmp()

void clean_all_tmp ( )

free all temporary buffers

Definition at line 4241 of file preferences.c.

◆ color_button_event()

void color_button_event	(	GtkWidget *	widget,
		double	event_x,
		double	event_y,
		guint	event_button,
		gpointer	data )

species color selection mouse button event

Parameters

widget	the GtkWidget sending the signal
event_x	x position
event_y	y position
event_button	event buttton
data	the associated data pointer

Definition at line 3090 of file preferences.c.

◆ color_set_color()

void color_set_color	(	GtkTreeViewColumn *	col,
		GtkCellRenderer *	renderer,
		GtkTreeModel *	mod,
		GtkTreeIter *	iter,
		gpointer	data )

set background color

Parameters

col	the tree view column
renderer	the column renderer
mod	the tree model
iter	the tree iter
data	the associated data pointer

Definition at line 2892 of file preferences.c.

◆ combo_map()

GtkWidget * combo_map ( int obj )

create color map combo

Parameters

obj	0 = atom(s), 1 = polyhedra

Definition at line 3693 of file preferences.c.

◆ copy_light_sources()

Light * copy_light_sources	(	int	dima,
		int	dimb,
		Light *	old_sp )

extern

create a copy of a list of light sources

Parameters

dima	new list size
dimb	old list size to duplicate
old_sp	old light sources

Definition at line 402 of file w_advance.c.

◆ create_user_preferences_dialog()

void create_user_preferences_dialog ( )

Definition at line 4802 of file preferences.c.

◆ cut_spec_changed()

G_MODULE_EXPORT void cut_spec_changed	(	GtkComboBox *	box,
		gpointer	data )

partial cutoff chemical species

Parameters

box	the GtkWidget sending the signal
data	the associated data pointer

Definition at line 3977 of file preferences.c.

◆ duplicate_axis_data()

void duplicate_axis_data	(	axis *	new_axis,
		axis *	old_axis )

duplicate axis_data data structure

Parameters

new_axis	the new axis_data structure
old_axis	the axis_data structure to copy

Definition at line 4415 of file preferences.c.

◆ duplicate_background_data()

void duplicate_background_data	(	background *	new_back,
		background *	old_back )

duplicate background data structure

Parameters

new_back	the new background structure
old_back	the background structure to copy

Definition at line 4378 of file preferences.c.

◆ duplicate_box_data()

void duplicate_box_data	(	box *	new_box,
		box *	old_box )

duplicate box_data data structure

Parameters

new_box	the new box structure
old_box	the box structure to copy

Definition at line 4399 of file preferences.c.

◆ duplicate_cutoffs()

bond_cutoff * duplicate_cutoffs ( bond_cutoff * old_cutoff )

duplicate bond cutoff data structure

Parameters

old_cutoff the cutoff data structure to duplicate

Definition at line 4021 of file preferences.c.

◆ duplicate_element_color()

element_color * duplicate_element_color ( element_color * old_list )

duplicate an element color data structure

Parameters

old_list the data structure to duplicate

Definition at line 2626 of file preferences.c.

◆ duplicate_element_radius()

element_radius * duplicate_element_radius ( element_radius * old_list )

duplicate an element radius data structure

Parameters

old_list the data structure to duplicate

Definition at line 2532 of file preferences.c.

◆ duplicate_fog()

void duplicate_fog	(	Fog *	new_fog,
		Fog *	old_fog )

extern

duplicate fog data

Parameters

new_fog	the new fog data
old_fog	the old fog data to be copied

Definition at line 203 of file ogl_draw.c.

◆ duplicate_material()

void duplicate_material	(	Material *	new_mat,
		Material *	old_mat )

extern

duplicate material data

Parameters

new_mat	the new material data
old_mat	the old material data to be copied

Definition at line 186 of file ogl_draw.c.

◆ duplicate_rep_data()

void duplicate_rep_data	(	rep_data *	new_rep,
		rep_data *	old_rep )

duplicate rep_data data structure

Parameters

new_rep	the new rep_data structure
old_rep	the rep_data structure to copy

Definition at line 4356 of file preferences.c.

◆ duplicate_screen_label()

void duplicate_screen_label	(	screen_label *	new_lab,
		screen_label *	old_lab )

extern

copy screen_label data structure

Parameters

new_lab	the new screen_label structure
old_lab	the old screen_label structure to be copied

Definition at line 239 of file ogl_draw.c.

◆ edit_bonds()

void edit_bonds ( GtkWidget * vbox )

extern

creation of the edit bond cutoff widgets

Parameters

vbox	the GtkWidget to store the data

Definition at line 699 of file edit_menu.c.

◆ edit_chem_preferences()

G_MODULE_EXPORT void edit_chem_preferences	(	GtkDialog *	edit_chem,
		gint	response_id,
		gpointer	data )

edit chem preferences - running the dialog

Parameters

edit_prefs	the GtkDialog sending the signal
response_id	the response id
data	the associated data pointer

Definition at line 2805 of file preferences.c.

◆ edit_cutoffs()

G_MODULE_EXPORT void edit_cutoffs	(	GtkDialog *	edit_cuts,
		gint	response_id,
		gpointer	data )

edit partial cutoffs - running the dialog

Parameters

edit_cuts	the GtkDialog sending the signal
response_id	the response id
data	the associated data pointer

Definition at line 4060 of file preferences.c.

◆ edit_pc_value()

G_MODULE_EXPORT void edit_pc_value	(	GtkEntry *	res,
		gpointer	data )

update partial cutoff value

Parameters

res	the GtkEntry the signal is coming from
data	the associated data pointer

Definition at line 3861 of file preferences.c.

◆ edit_pref()

G_MODULE_EXPORT void edit_pref	(	GtkCellRendererText *	cell,
		gchar *	path_string,
		gchar *	new_text,
		gpointer	user_data )

edit cell in the preferences tree model

Parameters

cell	the GtkCellRendererText sending the signal
path_string	the path in the tree model
new_text	the string describing the new value
user_data	the associated data pointer

Definition at line 2681 of file preferences.c.

◆ edit_preferences()

G_MODULE_EXPORT void edit_preferences	(	GtkDialog *	edit_prefs,
		gint	response_id,
		gpointer	data )

edit preferences - running the dialog

Parameters

edit_prefs	the GtkDialog sending the signal
response_id	the response id
data	the associated data pointer

Definition at line 4757 of file preferences.c.

◆ edit_species_parameters()

G_MODULE_EXPORT void edit_species_parameters	(	GtkButton *	but,
		gpointer	data )

edit atoms and bonds species related parameters

Parameters

but	the GtkButton sending the signal
data	the associated data pointer

Definition at line 3188 of file preferences.c.

◆ findnode()

xmlNodePtr findnode	(	xmlNodePtr	startnode,
		char *	nname )

extern

find XML node

Parameters

startnode	Starting node
nname	Node name to find

Definition at line 546 of file read_isaacs.c.

◆ fog_tab()

GtkWidget * fog_tab	(	glwin *	view,
		opengl_edition *	ogl_edit,
		Fog *	the_fog )

extern

OpenGL fog parameters tab.

Parameters

view	the target glwin
ogl_edit	the target OpenGL edition window
the_fog	the target fog data structure

Definition at line 1566 of file w_advance.c.

◆ get_radius()

float get_radius	(	int	object,
		int	col,
		int	z,
		element_radius *	rad_list )

retrieve the radius/width of a species depending on style

Parameters

object	the object to look at
col	modifier for tabulated radii
z	atomic number
rad_list	pre allocated data, if any

Definition at line 2564 of file preferences.c.

◆ get_spec_color()

ColRGBA get_spec_color	(	int	z,
		element_color *	clist )

retrieve the color of a chemical species

Parameters

z	atomic number
clist	the target color list, if any

Definition at line 2656 of file preferences.c.

◆ gradient_advanced()

G_MODULE_EXPORT void gradient_advanced	(	GtkWidget *	widg,
		gpointer	data )

extern

Background configuration window.

Parameters

widg	the widget sending the signal, if any
the	associated data pointer

Definition at line 434 of file w_colors.c.

◆ init_light_source()

Light init_light_source	(	int	type,
		float	val,
		float	vbl )

extern

initialize a light source

Parameters

type	the type of light
size	depth or max (a,b,c)
depth	field depth
intens

Definition at line 337 of file w_advance.c.

◆ labels_tab()

GtkWidget * labels_tab	(	glwin *	view,
		int	lid )

extern

create atomic label(s) tab for the atom(s) / clone(s) window

Parameters

view	the target glwin
lid	label type (0 = atoms, 1 = clones, 3 = analysis measures, 4 = edition mode measures)

Definition at line 624 of file w_labels.c.

◆ lightning_fix()

GtkWidget * lightning_fix	(	glwin *	view,
		Material *	this_material )

extern

Definition at line 1296 of file w_advance.c.

◆ lights_tab()

GtkWidget * lights_tab	(	glwin *	view,
		opengl_edition *	ogl_edit,
		Lightning *	the_lightning )

extern

OpenGL light(s) parameters tab.

Parameters

view	the target glwin
ogl_edit	the target OpenGL edition window
ogl_lightning	the target lightning data structure

Definition at line 938 of file w_advance.c.

◆ materials_tab()

GtkWidget * materials_tab	(	glwin *	view,
		opengl_edition *	ogl_edit,
		Material *	the_mat )

extern

OpenGL material parameters tab.

Parameters

view	the target glwin
ogl_edit	the target OpenGL edition window
the_mat	the target material data structure

Definition at line 1323 of file w_advance.c.

◆ model_preferences()

GtkWidget * model_preferences ( )

model preferences

Definition at line 3547 of file preferences.c.

◆ not_in_cutoffs()

gboolean not_in_cutoffs	(	int	z_a,
		int	z_b )

look in bond cutoff between species a and b is already defined

Definition at line 3958 of file preferences.c.

◆ opengl_preferences()

GtkWidget * opengl_preferences ( )

OpenGL preferences.

Definition at line 3709 of file preferences.c.

◆ over_param()

GtkWidget * over_param	(	int	object,
		int	style )

create override check button and entry

Parameters

object	0 = atoms, 1 = bonds
style	style id number

Definition at line 3422 of file preferences.c.

◆ pref_color_button_event()

G_MODULE_EXPORT gboolean pref_color_button_event	(	GtkWidget *	widget,
		GdkEvent *	event,
		gpointer	data )

Definition at line 3156 of file preferences.c.

◆ pref_list()

GtkWidget * pref_list	(	gchar *	mess[2],
		int	nelem,
		gchar *	mlist[nelem][2],
		gchar *	end )

print information message with item list of elements

Parameters

mess	main information message
nelem	number of elements in the list
mlsit	item list
end	end message, if any

Definition at line 2275 of file preferences.c.

◆ prepare_tmp_default()

void prepare_tmp_default ( )

prepare temporary parameters

Definition at line 4441 of file preferences.c.

◆ radius_set_color_and_markup()

void radius_set_color_and_markup	(	GtkTreeViewColumn *	col,
		GtkCellRenderer *	renderer,
		GtkTreeModel *	mod,
		GtkTreeIter *	iter,
		gpointer	data )

set text font and color

Parameters

col	the tree view column
renderer	the column renderer
mod	the tree model
iter	the tree iter
data	the associated data pointer

Definition at line 2912 of file preferences.c.

◆ read_light()

void read_light ( xmlNodePtr light_node )

read light preferences from XML configuration

Parameters

light_node

Definition at line 1724 of file preferences.c.

◆ read_parameter()

void read_parameter ( xmlNodePtr parameter_node )

read preferences from XML configuration

Parameters

parameter_node node the XML node that point to parameter

Definition at line 1609 of file preferences.c.

◆ read_preferences()

void read_preferences ( xmlNodePtr preference_node )

read preferences from XML configuration

Parameters

preference_node node the XML node that point to preferences

Definition at line 1805 of file preferences.c.

◆ read_preferences_from_xml_file()

void read_preferences_from_xml_file ( )

read software preferences from XML file

Definition at line 1862 of file preferences.c.

◆ read_style_from_xml_file()

void read_style_from_xml_file	(	xmlNodePtr	style_node,
		int	style )

read style preferences from XML file

Parameters

style_node	the XML node that point to style data
style	the target style

Definition at line 1820 of file preferences.c.

◆ representation_advanced()

G_MODULE_EXPORT void representation_advanced	(	GtkWidget *	widg,
		gpointer	data )

extern

open advanced representation dialog

Parameters

widg	the GtkWidget sending the signal
data	the associated data pointer

Definition at line 424 of file m_rep.c.

◆ restore_defaults_parameters()

G_MODULE_EXPORT void restore_defaults_parameters	(	GtkButton *	but,
		gpointer	data )

Definition at line 4726 of file preferences.c.

◆ run_ac_color()

G_MODULE_EXPORT void run_ac_color	(	GtkDialog *	win,
		gint	response_id,
		gpointer	data )

window color chooser - running the dialog

Parameters

win	the GtkDialog sending the signal
response_id	the response id
data	the associated data pointer

Definition at line 2995 of file preferences.c.

◆ save_preferences()

void save_preferences ( )

save user preferences

Definition at line 4559 of file preferences.c.

◆ save_preferences_to_xml_file()

int save_preferences_to_xml_file ( )

save software preferences to XML file

Definition at line 414 of file preferences.c.

◆ scale_quality()

G_MODULE_EXPORT void scale_quality	(	GtkRange *	range,
		gpointer	data )

extern

update OpenGL quality - range callback

Parameters

range	the GtkRange sending the signal
data	the associated data pointer

Definition at line 1280 of file w_advance.c.

◆ scroll_scale_quality()

G_MODULE_EXPORT gboolean scroll_scale_quality	(	GtkRange *	range,
		GtkScrollType	scroll,
		gdouble	value,
		gpointer	data )

extern

update OpenGL quality - scroll callback

Parameters

range	the GtkRange sending the signal
scroll	the associated scroll type
value	the range value
data	the associated data pointer

Definition at line 1263 of file w_advance.c.

◆ set_atomes_defaults()

void set_atomes_defaults ( )

set atomes default parameters

Definition at line 2050 of file preferences.c.

◆ set_atomes_preferences()

void set_atomes_preferences ( )

set software default parameters

Definition at line 2248 of file preferences.c.

◆ set_cutoffs_default()

G_MODULE_EXPORT void set_cutoffs_default	(	GtkButton *	but,
		gpointer	data )

set default cutoff radii

Parameters

but	the GtkButton sending the signal
data	the associated data pointer

Definition at line 4092 of file preferences.c.

◆ set_default_map()

G_MODULE_EXPORT void set_default_map	(	GtkComboBox *	box,
		gpointer	data )

change default atom(s) or polyhedra color map

Parameters

box	the GtkComboBox sending the signal
data	the associated data pointer

Definition at line 3678 of file preferences.c.

◆ set_default_num_delta()

G_MODULE_EXPORT void set_default_num_delta	(	GtkEntry *	res,
		gpointer	data )

update default number of delta preferences

Parameters

res	the GtkEntry the signal is coming from
data	the associated data pointer

Definition at line 3784 of file preferences.c.

◆ set_default_options()

G_MODULE_EXPORT void set_default_options	(	GtkButton *	but,
		gpointer	data )

set options as default options

Parameters

but	the GtkButton sending the signal
data	the associated data pointer

Definition at line 4861 of file preferences.c.

◆ set_default_stuff()

G_MODULE_EXPORT void set_default_stuff	(	GtkEntry *	res,
		gpointer	data )

update default number of delta preferences

Parameters

res	the GtkEntry the signal is coming from
data	the associated data pointer

Definition at line 2508 of file preferences.c.

◆ set_default_style()

G_MODULE_EXPORT void set_default_style	(	GtkComboBox *	box,
		gpointer	data )

change default atom(s) and bond(s) style

Parameters

box	the GtkComboBox sending the signal
data	the associated data pointer

Definition at line 3629 of file preferences.c.

◆ set_measures()

G_MODULE_EXPORT void set_measures	(	GtkComboBox *	box,
		gpointer	data )

change measure type

Parameters

box	the GtkComboBox sending the signal
data	the associated data pointer

Definition at line 2311 of file preferences.c.

◆ set_parameter()

void set_parameter	(	gchar *	content,
		gchar *	key,
		int	vid,
		dint *	bond,
		vec3_t *	vect,
		float	start,
		float	end,
		ColRGBA *	col )

set default parameter

Parameters

content	the string content
key	the name of variable to set
vid	the id number to set
bond	atoms, if any
vect	vector to set, if any
start	initial value, if any, -1.0 otherwise
end	final value, if any, -1.0 otherwise
col	color to set, if any

Definition at line 1215 of file preferences.c.

◆ set_selection_color()

G_MODULE_EXPORT void set_selection_color	(	GtkColorChooser *	colob,
		gpointer	data )

change selection color

Parameters

colob	the GtkColorChooser sending the signal
data	the associated data pointer

Definition at line 2336 of file preferences.c.

◆ set_stuff_color()

G_MODULE_EXPORT void set_stuff_color	(	GtkColorChooser *	colob,
		gpointer	data )

change stuff color

Parameters

colob	the GtkColorChooser sending the signal
data	the associated data pointer

Definition at line 3175 of file preferences.c.

◆ setup_fog_dialogs()

void setup_fog_dialogs	(	opengl_edition *	ogl_edit,
		int	fid )

extern

update OpenGL fog tab based of fog type

Parameters

ogl_edit	the target opengl_edition
fid	the fog mode

Definition at line 1509 of file w_advance.c.

◆ style_combo_tree()

GtkTreeModel * style_combo_tree ( )

create opengl style combo model

Definition at line 3646 of file preferences.c.

◆ style_tab()

GtkWidget * style_tab ( int style )

create preferences tab for a style

Parameters

style the style for this tab

Definition at line 3474 of file preferences.c.

◆ substitute_string()

gchar * substitute_string	(	gchar *	init,
		gchar *	o_motif,
		gchar *	n_motif )

extern

substitute all patterns in string

Parameters

init	the initial string
o_motif	the pattern to replace
n_motif	the new pattern

Definition at line 372 of file w_library.c.

◆ toggled_default_stuff()

G_MODULE_EXPORT void toggled_default_stuff	(	GtkToggleButton *	but,
		gpointer	data )

toggle set / unset default callback GTK3

Parameters

but	the GtkToggleButton sending the signal
data	the associated data pointer

Definition at line 2452 of file preferences.c.

◆ toggled_select_project()

G_MODULE_EXPORT void toggled_select_project	(	GtkToggleButton *	but,
		gpointer	data )

toggle select / unselect project to update callback GTK3

Parameters

but	the GtkToggleButton sending the signal
data	the associated data pointer

Definition at line 4548 of file preferences.c.

◆ toggled_use_cutoff()

G_MODULE_EXPORT void toggled_use_cutoff	(	GtkToggleButton *	but,
		gpointer	data )

Definition at line 3892 of file preferences.c.

◆ totcut_changed()

G_MODULE_EXPORT void totcut_changed	(	GtkComboBox *	box,
		gpointer	data )

change method to evaluate the total cutoff

Parameters

box	the GtkComboBox sending the signal
data	the associated data pointer

Definition at line 3838 of file preferences.c.

◆ tunit_changed()

G_MODULE_EXPORT void tunit_changed	(	GtkComboBox *	box,
		gpointer	data )

change default time units

Parameters

box	the GtkComboBox sending the signal
data	the associated data pointer

Definition at line 3817 of file preferences.c.

◆ update_gradient_widgets()

void update_gradient_widgets	(	gradient_edition *	gradient_win,
		background *	back )

extern

update the widgets of the gradient window

Parameters

gradient_win	the target gradient edition
back	the target background information

Definition at line 84 of file w_colors.c.

◆ update_light_data()

void update_light_data	(	int	li,
		opengl_edition *	ogl_win )

extern

update light data

Parameters

li	the light id
ogl_win	the target OpenGL edition window

Definition at line 474 of file w_advance.c.

◆ update_projects()

G_MODULE_EXPORT void update_projects	(	GtkDialog *	proj_sel,
		gint	response_id,
		gpointer	data )

update projects in the workspace using new preferences

Parameters

proj_sel	the GtkDialog sending the signal
response_id	the response id
data	the associated data pointer

Definition at line 4509 of file preferences.c.

◆ view_preferences()

GtkWidget * view_preferences ( )

view preferences

Definition at line 2347 of file preferences.c.

◆ xml_save_color_to_file()

int xml_save_color_to_file	(	xmlTextWriterPtr	writer,
		int	did,
		gchar *	legend,
		gchar *	key,
		ColRGBA	col )

save color data (red, green, blue, alpha) to XML file

Parameters

writer	the XML writer to update
did	id, if any
legend	the corresponding legend
data	the data to save

Definition at line 291 of file preferences.c.

◆ xml_save_parameter_to_file()

int xml_save_parameter_to_file	(	xmlTextWriterPtr	writer,
		gchar *	xml_leg,
		gchar *	xml_key,
		gboolean	doid,
		int	xml_id,
		gchar *	value )

save single parameter to XML file

Parameters

writer	the XML writer to update
xml_leg	information
xml_key	key
doid	add id attribute to parameter (1/0)
xml_id	value for id
value	parameter to write

Definition at line 385 of file preferences.c.

◆ xml_save_xyz_to_file()

int xml_save_xyz_to_file	(	xmlTextWriterPtr	writer,
		int	did,
		gchar *	legend,
		gchar *	key,
		vec3_t	data )

save vector data (x,y,z) to XML file

Parameters

writer	the XML writer to update
did	id, if any
legend	the corresponding legend
data	the data to save

Definition at line 339 of file preferences.c.

◆ xml_string_to_double()

double xml_string_to_double ( gchar * content )

convert XML string to double

Parameters

content the string to convert

Definition at line 1196 of file preferences.c.

Variable Documentation

◆ all_cut_box

GtkWidget* all_cut_box

Definition at line 3822 of file preferences.c.

◆ atom_entry_over

GtkWidget* atom_entry_over[8]

Definition at line 169 of file preferences.c.

◆ bond_entry_over

GtkWidget* bond_entry_over[6]

Definition at line 170 of file preferences.c.

◆ color_list

element_color* color_list

Definition at line 2426 of file preferences.c.

◆ cut_combo

GtkWidget* cut_combo[2]

Definition at line 3823 of file preferences.c.

◆ cut_comments

GtkWidget* cut_comments

Definition at line 3827 of file preferences.c.

◆ cut_list

bond_cutoff* cut_list

Definition at line 3828 of file preferences.c.

◆ default_acl_format

int default_acl_format[2]

Definition at line 244 of file preferences.c.

◆ default_at_rs

double* default_at_rs

Definition at line 235 of file preferences.c.

◆ default_atom_color

element_color* default_atom_color[2]

Definition at line 212 of file preferences.c.

◆ default_atomic_rad

element_radius* default_atomic_rad[16]

Definition at line 206 of file preferences.c.

◆ default_axis

axis default_axis

Definition at line 264 of file preferences.c.

◆ default_background

background default_background

Definition at line 258 of file preferences.c.

◆ default_bd_rw

double* default_bd_rw

Definition at line 239 of file preferences.c.

◆ default_bond_cutoff

bond_cutoff* default_bond_cutoff

Definition at line 179 of file preferences.c.

◆ default_bond_rad

element_radius* default_bond_rad[6]

Definition at line 209 of file preferences.c.

◆ default_box

box default_box

Definition at line 261 of file preferences.c.

◆ default_cell

gboolean default_cell

Definition at line 231 of file preferences.c.

◆ default_clones

gboolean default_clones

Definition at line 229 of file preferences.c.

◆ default_csparam

int* default_csparam = NULL

Chain statistics parameters:
0 = Initial node(s) for the search: selected chemical species or all atoms,
1 = Maximum size for a chain Cmax,
2 = Maximum number of chain(s) per MD step CNUMA,
3 = Search only for AAAA chains or not,
4 = Search only for ABAB chains or not,
5 = Include Homopolar bond(s) in the analysis or not,
6 = Search only for 1-(2)n-1 chains

Definition at line 195 of file preferences.c.

◆ default_delta_t

double* default_delta_t = NULL

0 = time step,
1 = time unit , in: fs, ps, ns, µs, ms

Definition at line 183 of file preferences.c.

◆ default_fog

Fog default_fog

Definition at line 225 of file preferences.c.

◆ default_label

screen_label default_label[5]

Definition at line 242 of file preferences.c.

◆ default_label_color

element_color* default_label_color[2]

Definition at line 214 of file preferences.c.

◆ default_lightning

Lightning default_lightning

Definition at line 223 of file preferences.c.

◆ default_material

Material default_material

Definition at line 221 of file preferences.c.

◆ default_mfactor

int default_mfactor[2]

Definition at line 250 of file preferences.c.

◆ default_mpattern

int default_mpattern[2]

Definition at line 248 of file preferences.c.

◆ default_mtilt

gboolean default_mtilt[2]

Definition at line 246 of file preferences.c.

◆ default_mwidth

double default_mwidth[2]

Definition at line 252 of file preferences.c.

◆ default_num_delta

int* default_num_delta = NULL

Number of x points:
0 = gr,
1 = sq,
2 = sk,
3 = gftt,
4 = bd,
5 = an,
6 = sp
7 = msd

Definition at line 181 of file preferences.c.

◆ default_o_at_rs

gboolean* default_o_at_rs

Definition at line 233 of file preferences.c.

◆ default_o_bd_rw

gboolean* default_o_bd_rw

Definition at line 237 of file preferences.c.

◆ default_opengl

int* default_opengl = NULL

Definition at line 219 of file preferences.c.

◆ default_rep

rep_data default_rep

Definition at line 255 of file preferences.c.

◆ default_rsparam

int* default_rsparam = NULL

Ring statistics parameters:
0 = Default search,
1 = Initial node(s) for the search: selected chemical species or all atoms,
2 = Maximum size of ring for the search Rmax,
3 = Maximum number of ring(s) per MD step NUMA,
4 = Search only for ABAB rings or not,
5 = Include Homopolar bond(s) in the analysis or not,
6 = Include homopolar bond(s) when calculating the distance matrix

Definition at line 186 of file preferences.c.

◆ default_sel_color

ColRGBA default_sel_color[2]

Definition at line 267 of file preferences.c.

◆ default_totcut

double default_totcut

Definition at line 177 of file preferences.c.

◆ edit_colob

GtkWidget* edit_colob

Definition at line 2430 of file preferences.c.

◆ edit_list

element_radius** edit_list

Definition at line 2425 of file preferences.c.

◆ edit_scrol

GtkWidget* edit_scrol

Definition at line 2429 of file preferences.c.

◆ label_id

int label_id

Definition at line 1187 of file preferences.c.

◆ mat_min_max

float mat_min_max[5][2]

extern

Definition at line 113 of file w_advance.c.

◆ meas_box

GtkWidget* meas_box[2]

Definition at line 172 of file preferences.c.

◆ meas_combo

GtkWidget* meas_combo

Definition at line 171 of file preferences.c.

◆ ogl_settings

gchar* ogl_settings[3][10]

extern

Definition at line 119 of file w_advance.c.

◆ pcut_box

GtkWidget* pcut_box[2]

Definition at line 3824 of file preferences.c.

◆ pref_axis_win

axis_edition* pref_axis_win = NULL

Definition at line 266 of file preferences.c.

◆ pref_box_win

box_edition* pref_box_win = NULL

Definition at line 263 of file preferences.c.

◆ pref_error

gchar* pref_error = NULL

Definition at line 272 of file preferences.c.

◆ pref_gradient_win

gradient_edition* pref_gradient_win = NULL

Definition at line 260 of file preferences.c.

◆ pref_ogl_edit

opengl_edition* pref_ogl_edit = NULL

Definition at line 271 of file preferences.c.

◆ pref_pointer

tint* pref_pointer = NULL

Definition at line 274 of file preferences.c.

◆ pref_rep_win

rep_edition* pref_rep_win = NULL

Definition at line 257 of file preferences.c.

◆ pref_tree

GtkWidget* pref_tree

Definition at line 2427 of file preferences.c.

◆ preference_notebook

GtkWidget* preference_notebook = NULL

Definition at line 175 of file preferences.c.

◆ preferences

gboolean preferences = FALSE

Definition at line 270 of file preferences.c.

◆ radius_id

int radius_id

Definition at line 217 of file preferences.c.

◆ search_type

int search_type

extern

Definition at line 92 of file calc_menu.c.

◆ sel_box

GtkWidget* sel_box[2]

Definition at line 174 of file preferences.c.

◆ sel_combo

GtkWidget* sel_combo

Definition at line 173 of file preferences.c.

◆ tcut_box

GtkWidget* tcut_box

Definition at line 3826 of file preferences.c.

◆ tcut_entry

GtkWidget* tcut_entry

Definition at line 3825 of file preferences.c.

◆ the_object

int the_object

Definition at line 2424 of file preferences.c.

◆ tmp_acl_format

int tmp_acl_format[2]

Definition at line 245 of file preferences.c.

◆ tmp_at_rs

double* tmp_at_rs

Definition at line 236 of file preferences.c.

◆ tmp_atom_color

element_color* tmp_atom_color[2]

Definition at line 213 of file preferences.c.

◆ tmp_atomic_rad

element_radius* tmp_atomic_rad[16]

Definition at line 207 of file preferences.c.

◆ tmp_axis

axis* tmp_axis = NULL

Definition at line 265 of file preferences.c.

◆ tmp_background

background* tmp_background = NULL

Definition at line 259 of file preferences.c.

◆ tmp_bd_rw

double* tmp_bd_rw

Definition at line 240 of file preferences.c.

◆ tmp_bond_cutoff

bond_cutoff* tmp_bond_cutoff

Definition at line 180 of file preferences.c.

◆ tmp_bond_rad

element_radius* tmp_bond_rad[6]

Definition at line 210 of file preferences.c.

◆ tmp_box

box* tmp_box = NULL

Definition at line 262 of file preferences.c.

◆ tmp_cell

gboolean tmp_cell

Definition at line 232 of file preferences.c.

◆ tmp_clones

gboolean tmp_clones

Definition at line 230 of file preferences.c.

◆ tmp_color

ColRGBA* tmp_color

Definition at line 2431 of file preferences.c.

◆ tmp_csparam

int* tmp_csparam = NULL

Definition at line 203 of file preferences.c.

◆ tmp_delta_t

double* tmp_delta_t = NULL

Definition at line 184 of file preferences.c.

◆ tmp_fog

Fog tmp_fog

Definition at line 226 of file preferences.c.

◆ tmp_label

screen_label* tmp_label[5]

Definition at line 243 of file preferences.c.

◆ tmp_label_color

element_color* tmp_label_color[2]

Definition at line 215 of file preferences.c.

◆ tmp_lightning

Lightning tmp_lightning

Definition at line 224 of file preferences.c.

◆ tmp_material

Material tmp_material

Definition at line 222 of file preferences.c.

◆ tmp_mfactor

int tmp_mfactor[2]

Definition at line 251 of file preferences.c.

◆ tmp_mpattern

int tmp_mpattern[2]

Definition at line 249 of file preferences.c.

◆ tmp_mtilt

gboolean tmp_mtilt[2]

Definition at line 247 of file preferences.c.

◆ tmp_mwidth

double tmp_mwidth[2]

Definition at line 253 of file preferences.c.

◆ tmp_num_delta

int* tmp_num_delta = NULL

Definition at line 182 of file preferences.c.

◆ tmp_o_at_rs

gboolean* tmp_o_at_rs

Definition at line 234 of file preferences.c.

◆ tmp_o_bd_rw

gboolean* tmp_o_bd_rw

Definition at line 238 of file preferences.c.

◆ tmp_opengl

int* tmp_opengl = NULL

Definition at line 220 of file preferences.c.

◆ tmp_rep

rep_data* tmp_rep = NULL

Definition at line 256 of file preferences.c.

◆ tmp_rsparam

int* tmp_rsparam = NULL

Definition at line 194 of file preferences.c.

◆ tmp_sel_color

ColRGBA tmp_sel_color[2]

Definition at line 268 of file preferences.c.

◆ tmp_totcut

double tmp_totcut

Definition at line 178 of file preferences.c.

◆ up_project

gboolean* up_project

Definition at line 4498 of file preferences.c.

◆ user_defined

gboolean user_defined

Definition at line 2428 of file preferences.c.

◆ xml_atom_leg

gchar* xml_atom_leg[3] = {"atoms_radius", "dot_size", "sphere_radius"}

Definition at line 278 of file preferences.c.

◆ xml_bond_leg

gchar* xml_bond_leg[3] = {"bond_radius", "wireframe_width", "cylinder_radius"}

Definition at line 279 of file preferences.c.

◆ xml_filled_leg

gchar* xml_filled_leg[4] = {"covalent", "ionic", "van-der-waals", "crystal"}

Definition at line 277 of file preferences.c.

◆ xml_style_leg

gchar* xml_style_leg[6] = {"ball_and_stick", "wireframes", "spacefilled", "spheres", "cylinders", "dots"}

Definition at line 276 of file preferences.c.

Functions

Variables

Detailed Description

Function Documentation

◆ add_cut_box()

◆ add_global_option()

◆ adjust_preferences_window()

◆ adv_box()

◆ apply_default_parameters_to_project()

◆ are_identical_colors()

◆ axis_advanced()

◆ box_advanced()

◆ calc_preferences()

◆ calc_rings()

◆ clean_all_tmp()

◆ color_button_event()

◆ color_set_color()

◆ combo_map()

◆ copy_light_sources()

◆ create_user_preferences_dialog()

◆ cut_spec_changed()

◆ duplicate_axis_data()

◆ duplicate_background_data()

◆ duplicate_box_data()

◆ duplicate_cutoffs()

◆ duplicate_element_color()

◆ duplicate_element_radius()

◆ duplicate_fog()

◆ duplicate_material()

◆ duplicate_rep_data()

◆ duplicate_screen_label()

◆ edit_bonds()

◆ edit_chem_preferences()

◆ edit_cutoffs()

◆ edit_pc_value()

◆ edit_pref()

◆ edit_preferences()

◆ edit_species_parameters()

◆ findnode()

◆ fog_tab()

◆ get_radius()

◆ get_spec_color()

◆ gradient_advanced()

◆ init_light_source()

◆ labels_tab()

◆ lightning_fix()

◆ lights_tab()

◆ materials_tab()

◆ model_preferences()

◆ not_in_cutoffs()

◆ opengl_preferences()

◆ over_param()

◆ pref_color_button_event()

◆ pref_list()

◆ prepare_tmp_default()

◆ radius_set_color_and_markup()

◆ read_light()

◆ read_parameter()

◆ read_preferences()

◆ read_preferences_from_xml_file()

◆ read_style_from_xml_file()

◆ representation_advanced()

◆ restore_defaults_parameters()

◆ run_ac_color()

◆ save_preferences()

◆ save_preferences_to_xml_file()

◆ scale_quality()

◆ scroll_scale_quality()

◆ set_atomes_defaults()

◆ set_atomes_preferences()

◆ set_cutoffs_default()

◆ set_default_map()

◆ set_default_num_delta()

◆ set_default_options()

◆ set_default_stuff()

◆ set_default_style()

◆ set_measures()

◆ set_parameter()

◆ set_selection_color()

◆ set_stuff_color()