dlp_viz.c File Reference

functions to handle the visualization events when creating a classical force field More...

#include "dlp_field.h"
#include "project.h"
#include "glwindow.h"
#include "glview.h"

Include dependency graph for dlp_viz.c:

Go to the source code of this file.

Functions
void	update_selection_list (atom_selection *at_list, atom *at, gboolean add)
	update the selection list adding or removing an atom
void	init_default_shaders (glwin *view)
	re-initialize the default OpenGL shaders
void	field_selection (int i, int viz, int lab, int aid)
	select / unselect atom
void	viz_fragment (field_molecule *fmol, int id, int viz)
	show / hide fragment
void	field_unselect_all ()
	unselect all atoms
gboolean	in_bond (int at, int bd[2])
	is atom at in bond bd
void	visualize_bonds (int viz, int bid, field_atom *at, field_atom *bt)
	show / hide bond / bond restraint
void	visualize_angles (int viz, int aid, field_atom *at, field_atom *bt, field_atom *ct)
	show / hide angle / angle restraint
void	visualize_dihedrals (int viz, int did, field_atom *at, field_atom *bt, field_atom *ct, field_atom *dt)
	show / hide dihedral / dihedral restraint
void	visualize_imp_inv (int viz, int dih, int iid, field_atom *at, field_atom *bt, field_atom *ct, field_atom *dt)
	show / hide improper or inversion
void	visualize_body (int viz, int bd, field_nth_body *body)
	show / hide non bonded interaction
int	get_field_objects (int id, int jd)
	get the number of this type of field object
void	select_object (int id, int jd, int kd)
	select structural element
void	visualize_single_struct (int id, int jd, int kd, int *ids)
	visualize single structural element
void	visualize_object (int id, int jd, int kd)
	visualize object and update OpenGL rendering
void	check_to_visualize_properties_for_this_field_mol (int pid, int mol)
	check if rendering is required for object in molecule
void	check_to_visualize_properties (int pid)
	check if it is requried to update rendering
void	update_mol_tree (int a, int b)
	update the field molecule tree model
G_MODULE_EXPORT void	on_toggle_visualize_or_select_object (GtkCellRendererToggle *cell_renderer, gchar *string_path, gpointer data)
	on visualize force field object toggle callback
gboolean	show_field_object (int id, int jd, int kd)
	is the field object visible ?
G_MODULE_EXPORT void	visualize_or_select_all_elements (GtkTreeViewColumn *col, gpointer data)
	select all element(s) in the column for visualization

Variables
tint	toviz
int	is_special [MAXDATA][11]

Detailed Description

functions to handle the visualization events when creating a classical force field

Author

Sébastien Le Roux sebas.nosp@m.tien.nosp@m..lero.nosp@m.ux@i.nosp@m.pcms..nosp@m.unis.nosp@m.tra.f.nosp@m.r

Definition in file dlp_viz.c.

Function Documentation

check_to_visualize_properties()

void check_to_visualize_properties

(

int

pid

)

check if it is requried to update rendering

Parameters

pid	the page number in the assistant

Definition at line 768 of file dlp_viz.c.

check_to_visualize_properties_for_this_field_mol()

void check_to_visualize_properties_for_this_field_mol	(	int	pid,
		int	mol )

check if rendering is required for object in molecule

Parameters

pid	the type of field object
mol	the target field molecule

Definition at line 737 of file dlp_viz.c.

field_selection()

void field_selection	(	int	i,
		int	viz,
		int	lab,
		int	aid )

select / unselect atom

Parameters

i	the atom id in the model
viz	visualization status (0= hide, 1 = show)
lab	the value to display for the label
aid	the value to use for the color

Definition at line 91 of file dlp_viz.c.

field_unselect_all()

void field_unselect_all

(

)

unselect all atoms

Definition at line 130 of file dlp_viz.c.

get_field_objects()

int get_field_objects	(	int	id,
		int	jd )

get the number of this type of field object

Parameters

id	the tyoe of field object
jd	the field molecule id

Definition at line 367 of file dlp_viz.c.

in_bond()

gboolean in_bond ( int at, int bd[2] )

extern

is atom at in bond bd

Parameters

at	the target atom id
bd	the bond atoms id

Definition at line 892 of file dlp_init.c.

init_default_shaders()

void init_default_shaders ( glwin * view )

extern

re-initialize the default OpenGL shaders

Parameters

view	the target glwin

Definition at line 729 of file ogl_shading.c.

on_toggle_visualize_or_select_object()

G_MODULE_EXPORT void on_toggle_visualize_or_select_object	(	GtkCellRendererToggle *	cell_renderer,
		gchar *	string_path,
		gpointer	data )

on visualize force field object toggle callback

Parameters

cell_renderer	the GtkCellRendererToggle sending the signal
string_path	the path in the tree store
data	the associated data pointer

Definition at line 830 of file dlp_viz.c.

select_object()

void select_object	(	int	id,
		int	jd,
		int	kd )

select structural element

Parameters

id	the type of structural element
jd	the object id, if any
kd	the field molecule id

Definition at line 425 of file dlp_viz.c.

show_field_object()

gboolean show_field_object	(	int	id,
		int	jd,
		int	kd )

is the field object visible ?

Parameters

id	the type of object
jd	the object id, if any
kd	the field molecule id, if any

Definition at line 973 of file dlp_viz.c.

update_mol_tree()

void update_mol_tree	(	int	a,
		int	b )

update the field molecule tree model

Parameters

a	0 = show molecule id, 1 = show atom id in fragment
b	the target field molecule id

Definition at line 787 of file dlp_viz.c.

update_selection_list()

void update_selection_list ( atom_selection * at_list, atom * at, gboolean add )

extern

update the selection list adding or removing an atom

Parameters

at_list	target atom selection
at	atom
add	add or remove (1/0)

Definition at line 445 of file selection.c.

visualize_angles()

void visualize_angles	(	int	viz,
		int	aid,
		field_atom *	at,
		field_atom *	bt,
		field_atom *	ct )

show / hide angle / angle restraint

Parameters

viz	visualization status (0 = hide, 1 = show)
aid	the id of the structural element
at	1st field atom
bt	2nd field atom
ct	3rd field atom

Definition at line 185 of file dlp_viz.c.

visualize_body()

void visualize_body	(	int	viz,
		int	bd,
		field_nth_body *	body )

show / hide non bonded interaction

Parameters

viz	visualization status (0 = hide, 1 = show)
bd	the type of non bonded interaction
body	the target non bonded interaction

Definition at line 341 of file dlp_viz.c.

visualize_bonds()

void visualize_bonds	(	int	viz,
		int	aid,
		field_atom *	at,
		field_atom *	bt )

show / hide bond / bond restraint

Parameters

viz	visualization status (0 = hide, 1 = show)
aid	the id of the structural element
at	1st field atom
bt	2nd field atom

Definition at line 151 of file dlp_viz.c.

visualize_dihedrals()

void visualize_dihedrals	(	int	viz,
		int	did,
		field_atom *	at,
		field_atom *	bt,
		field_atom *	ct,
		field_atom *	dt )

show / hide dihedral / dihedral restraint

Parameters

viz	visualization status (0 = hide, 1 = show)
did	the id of the structural element
at	1st field atom
bt	2nd field atom
ct	3rd field atom
dt	4th field atom

Definition at line 230 of file dlp_viz.c.

visualize_imp_inv()

void visualize_imp_inv	(	int	viz,
		int	dih,
		int	iid,
		field_atom *	at,
		field_atom *	bt,
		field_atom *	ct,
		field_atom *	dt )

show / hide improper or inversion

Parameters

viz	visualization status (0 = hide, 1 = show)
dih	6 = improper, 7 = inversion
iid	the id of the structural element
at	1st field atom
bt	2nd field atom
ct	3rd field atom
dt	4th field atom

Definition at line 285 of file dlp_viz.c.

visualize_object()

void visualize_object	(	int	id,
		int	jd,
		int	kd )

visualize object and update OpenGL rendering

Parameters

id	the type of object
jd	the molecule id, if any
kd	the object id, if any

Definition at line 552 of file dlp_viz.c.

visualize_or_select_all_elements()

G_MODULE_EXPORT void visualize_or_select_all_elements	(	GtkTreeViewColumn *	col,
		gpointer	data )

select all element(s) in the column for visualization

Parameters

col	the target GtkTreeViewColumn
data	the associated data pointer

Definition at line 1024 of file dlp_viz.c.

visualize_single_struct()

void visualize_single_struct	(	int	id,
		int	jd,
		int	kd,
		int *	ids )

visualize single structural element

Parameters

id	the type of structural element
jd	the object id, if any
kd	the field molecule id
ids	the list of atom id in the fragment

Definition at line 488 of file dlp_viz.c.

viz_fragment()

void viz_fragment	(	field_molecule *	fmol,
		int	id,
		int	viz )

show / hide fragment

Parameters

fmol	the target field molecule
id	the fragment id
viz	visualization status (0 = hide, 1 = show)

Definition at line 115 of file dlp_viz.c.

Variable Documentation

is_special

int is_special[MAXDATA][11]

extern

Definition at line 883 of file dlp_field.c.

toviz

tint toviz

Definition at line 75 of file dlp_viz.c.