selection.c File Reference

Functions handling the atom and bond selection process in the OpenGL window. More...

#include "global.h"
#include "interface.h"
#include "glview.h"
#include "atom_edit.h"

Include dependency graph for selection.c:

Go to the source code of this file.

Functions
G_MODULE_EXPORT void	window_measures (GtkWidget *widg, gpointer data)
	create the measurements window
void	dihedrals_loop (glwin *view, int id, int pi, GtkTreeStore *store)
	do things for the measured dihedrals selection
void	angles_loop (glwin *view, int id, int pi, GtkTreeStore *store)
	do things for the measured angles selection
void	bonds_loop (glwin *view, int id, int pi, GtkTreeStore *store)
	do things for the measured distances selection
void	update_label_selection (glwin *view, int pi)
	update the text information for the number of atoms/measures in selection
int	get_to_be_selected (glwin *view)
	find which atom(s) are to be selected
int	find_bond_in_bonds (project *this_proj, int i, int j, int b, int id)
	Find for a bond ID in the bond list using the atoms in the bond.
int	find_selected_bond (project *this_proj, int id)
	find the selected bond based of the picked color id
int	find_selected_atom (project *this_proj, int id)
	find the selected atom based of the picked color id
int	num_bonds (int i)
	number of distinct pair(s) of atoms in selection
int	num_angles (int i)
	number of distinct triplet(s) of atoms in selection
int	num_dihedrals (int i)
	number of distinct quadruplet(s) of atoms in selection
void	save_dihedral_selection (glwin *view, int pi)
	save the dihedral selection data
void	update_dihedral_selection (glwin *view, int pi)
	update the dihedral selection data
void	save_angle_selection (glwin *view, int pi)
	save the angle selection data
void	update_angle_selection (glwin *view, int pi)
	update the angle selection data
void	save_bond_selection (glwin *view, int pi)
	save the bond selection data
void	update_bond_selection (glwin *view, int pi)
	update the bond selection data
void	save_all_selections (glwin *view, int pi)
	save all selection data
void	update_all_selections (glwin *view, int pi)
	update the selection data: bonds, angles and dihedrals
atom_in_selection *	new_atom_in_selection (int id, int sp)
	create a selected atom
void	update_selection_list (atom_selection *at_list, atom *at, gboolean add)
	update the selection list adding or removing an atom
void	process_selected_atom (project *this_proj, glwin *view, int id, int ac, int se, int pi)
	process selected atom
void	process_selection (project *this_proj, glwin *view, int id, int ac, int pi)
	process selection
void	process_the_hits (glwin *view, gint event_button, double ptx, double pty)
	process a mouse click

Variables
int	selected_aspec
int	objects [3] = {0, 0, 0}
int *	object_was_selected [3] = {NULL, NULL, NULL}
int **	tmp_object_id [3] = {NULL, NULL, NULL}

Detailed Description

Functions handling the atom and bond selection process in the OpenGL window.

Author

Sébastien Le Roux sebas.nosp@m.tien.nosp@m..lero.nosp@m.ux@i.nosp@m.pcms..nosp@m.unis.nosp@m.tra.f.nosp@m.r

Definition in file selection.c.

Function Documentation

angles_loop()

void angles_loop ( glwin * view, int id, int pi, GtkTreeStore * store )

extern

do things for the measured angles selection

Parameters

view	the target glwin
id	action to perform: -2 = save angles selection, -1 = clean angles selection, 0 = prepare OpenGL buffer data analysis mode selection measure, 1 = prepare OpenGL buffer data edition mode selection measure, 2 = fill angles tree store measures window
pi	0 = mouse analysis mode, 1 = mouse edition mode
store	the tree store to fill, if any

Definition at line 204 of file d_measures.c.

bonds_loop()

void bonds_loop ( glwin * view, int id, int pi, GtkTreeStore * store )

extern

do things for the measured distances selection

Parameters

view	the target glwin
id	action to perform: -2 = save bonds selection -1 = clean bonds selection 0 = prepare OpenGL buffer data analysis mode selection measure 1 = prepare OpenGL buffer data edition mode selection measure 2 = fill bonds distances tree store measures window
pi	0 = mouse analysis mode, 1 = mouse edition mode
store	the tree store to fill, if any

Definition at line 530 of file d_measures.c.

dihedrals_loop()

void dihedrals_loop ( glwin * view, int id, int pi, GtkTreeStore * store )

extern

do things for the measured dihedrals selection

Parameters

view	the target glwin
id	action to perform: -2 = save dihedrals selection -1 = clean dihedrals selection 0 = prepare OpenGL buffer data analysis mode selection measure 1 = prepare OpenGL buffer data edition mode selection measure 2 = fill dihedrals tree store measures window
pi	0 = mouse analysis mode, 1 = mouse edition mode
store	the tree store to fill, if any

Definition at line 319 of file d_measures.c.

find_bond_in_bonds()

int find_bond_in_bonds	(	project *	this_proj,
		int	i,
		int	j,
		int	b,
		int	id )

Find for a bond ID in the bond list using the atoms in the bond.

Parameters

this_proj	the target project
i	id tracker
j	the MD step
b	0 = normal, 1 = clones
id	the id-th visible bond to find

Definition at line 81 of file selection.c.

find_selected_atom()

int find_selected_atom	(	project *	this_proj,
		int	id )

find the selected atom based of the picked color id

Parameters

this_proj	the target project
id	the id-th visible atom or clone to find

Definition at line 151 of file selection.c.

find_selected_bond()

int find_selected_bond	(	project *	this_proj,
		int	id )

find the selected bond based of the picked color id

Parameters

this_proj	the target project
id	the id-th visible bond to find

Definition at line 114 of file selection.c.

get_to_be_selected()

int get_to_be_selected ( glwin * view )

extern

find which atom(s) are to be selected

Parameters

view	the target glwin

Definition at line 197 of file popup.c.

new_atom_in_selection()

atom_in_selection * new_atom_in_selection	(	int	id,
		int	sp )

create a selected atom

Parameters

id	atom id
sp	atom species

Definition at line 428 of file selection.c.

num_angles()

int num_angles

(

int

i

)

number of distinct triplet(s) of atoms in selection

Parameters

i	the number of atom(s) in selection

Definition at line 195 of file selection.c.

num_bonds()

int num_bonds

(

int

i

)

number of distinct pair(s) of atoms in selection

Parameters

i	the number of atom(s) in selection

Definition at line 183 of file selection.c.

num_dihedrals()

int num_dihedrals

(

int

i

)

number of distinct quadruplet(s) of atoms in selection

Parameters

i	the number of atom(s) in selection

Definition at line 207 of file selection.c.

process_selected_atom()

void process_selected_atom	(	project *	this_proj,
		glwin *	view,
		int	id,
		int	ac,
		int	se,
		int	pi )

process selected atom

Parameters

this_proj	the target project
view	the target glwin
id	the atom id
ac	atom or clone (0/1)
se	set to 0 to ensure to remove a selected atom from the list and not to add label
pi	selection mode (0 = normal mode, 1 = edition mode)

Definition at line 514 of file selection.c.

process_selection()

void process_selection	(	project *	this_proj,
		glwin *	view,
		int	id,
		int	ac,
		int	pi )

process selection

Parameters

this_proj	the target project
view	the target glwin
id	the atom id
ac	atom or clone (0/1)
pi	selection mode (0 = normal mode, 1 = edition mode)

Definition at line 562 of file selection.c.

process_the_hits()

void process_the_hits	(	glwin *	view,
		gint	event_button,
		double	ptx,
		double	pty )

process a mouse click

Parameters

view	the target glwin
event_button	the event button
ptx	x position
pty	y position

Definition at line 590 of file selection.c.

save_all_selections()

void save_all_selections	(	glwin *	view,
		int	pi )

save all selection data

Parameters

view	the target glwin
pi	selection mode (0 = normal mode, 1 = edition mode)

Definition at line 372 of file selection.c.

save_angle_selection()

void save_angle_selection	(	glwin *	view,
		int	pi )

save the angle selection data

Parameters

view	the target glwin
pi	selection mode (0 = normal mode, 1 = edition mode)

Definition at line 271 of file selection.c.

save_bond_selection()

void save_bond_selection	(	glwin *	view,
		int	pi )

save the bond selection data

Parameters

view	the target glwin
pi	selection mode (0 = normal mode, 1 = edition mode)

Definition at line 318 of file selection.c.

save_dihedral_selection()

void save_dihedral_selection	(	glwin *	view,
		int	pi )

save the dihedral selection data

Parameters

view	the target glwin
pi	selection mode (0 = normal mode, 1 = edition mode)

Definition at line 224 of file selection.c.

update_all_selections()

void update_all_selections	(	glwin *	view,
		int	pi )

update the selection data: bonds, angles and dihedrals

Parameters

view	the target glwin
pi	selection mode (0 = normal mode, 1 = edition mode)

Definition at line 387 of file selection.c.

update_angle_selection()

void update_angle_selection	(	glwin *	view,
		int	pi )

update the angle selection data

Parameters

view	the target glwin
pi	selection mode (0 = normal mode, 1 = edition mode)

Definition at line 298 of file selection.c.

update_bond_selection()

void update_bond_selection	(	glwin *	view,
		int	pi )

update the bond selection data

Parameters

view	the target glwin
pi	selection mode (0 = normal mode, 1 = edition mode)

Definition at line 345 of file selection.c.

update_dihedral_selection()

void update_dihedral_selection	(	glwin *	view,
		int	pi )

update the dihedral selection data

Parameters

view	the target glwin
pi	selection mode (0 = normal mode, 1 = edition mode)

Definition at line 251 of file selection.c.

update_label_selection()

void update_label_selection ( glwin * view, int sid )

extern

update the text information for the number of atoms/measures in selection

Parameters

view	the target glwin
sid	the type of selection (0 = analysis mode, 1 = edition mode)

Definition at line 648 of file w_measures.c.

update_selection_list()

void update_selection_list	(	atom_selection *	at_list,
		atom *	at,
		gboolean	add )

update the selection list adding or removing an atom

Parameters

at_list	target atom selection
at	atom
add	add or remove (1/0)

Definition at line 445 of file selection.c.

window_measures()

G_MODULE_EXPORT void window_measures ( GtkWidget * widg, gpointer data )

extern

create the measurements window

Parameters

widg	the GtkWidget sending the signal
data	the associated data pointer

Definition at line 739 of file w_measures.c.

Variable Documentation

object_was_selected

int* object_was_selected[3] = {NULL, NULL, NULL}

Definition at line 213 of file selection.c.

objects

int objects[3] = {0, 0, 0}

Definition at line 212 of file selection.c.

selected_aspec

int selected_aspec

extern

Definition at line 180 of file popup.c.

tmp_object_id

int** tmp_object_id[3] = {NULL, NULL, NULL}

Definition at line 214 of file selection.c.